Pectobacterium aquaticum A212-S19-A16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium aquaticum A212-S19-A16 is a Gram-negative bacterium characterized by the presence of flagella, which suggests it has motility capabilities. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genome of Pectobacterium aquaticum A212-S19-A16 is accessible under the accession number CP086253.1. As a member of the genus Pectobacterium, this bacterium is likely involved in plant-pathogenic interactions, which may have implications for agricultural practices. The flagella may enhance its ability to colonize plant surfaces or move toward nutrients, highlighting its potential role in plant microbiomes and its interactions within those ecosystems. In ecological terms, the presence of Pectobacterium aquaticum A212-S19-A16 in various habitats may influence the health of plant populations, affecting their growth and yield. Understanding the characteristics of this bacterium can provide insights into its ecological roles and potential management strategies in agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium aquaticum
StrainA212-S19-A16

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium aquaticum A212-S19-A16, Complete Genome

Gene Summary

Adenine Count

1087875 bp

Thymine Count

1088692 bp

Guanine Count

1148674 bp

Cytosine Count

1139184 bp

Genome Length

4464425 bp

Protein-coding Genes

3959 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome silencing factorDMB82_0014575P0AAT7Positive3121973 - 312229011428.6
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhDMB82_0014580C6DBW3Positive3122292 - 312276217686.4
peptidoglycan dd-transpeptidase mrdaDMB82_0014585P0AD67Positive3122796 - 312470071379.0
peptidoglycan glycosyltransferase mrdbDMB82_0014590P0ABG8Positive3124710 - 312582240631.8
endolytic peptidoglycan transglycosylase rlpaDMB82_0014595Q8ZDG6Positive3125836 - 312695739060.8
d-alanyl-d-alanine carboxypeptidase dacaDMB82_0014600P0AEB4Positive3127124 - 312833544061.8
duf493 family protein ybedDMB82_0014605C6DBV8Positive3128485 - 31287489861.01
lipoyl(octanoyl) transferase lipbDMB82_0014610C6DBV7Positive3128909 - 312959225173.6
lipoyl synthaseDMB82_0014615C6DBV6Positive3129820 - 313078536235.9
sec-independent protein translocase subunit tataDMB82_0014620C6CQJ7Negative3130868 - 31310656871.4

Displaying genes 2921 – 2930 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.