Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aquaticum |
| Strain | A212-S19-A16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1087875 bp
Thymine Count
1088692 bp
Guanine Count
1148674 bp
Cytosine Count
1139184 bp
Genome Length
4464425 bp
Protein-coding Genes
3959 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | DMB82_0014575 | P0AAT7 | Positive | 3121973 - 3122290 | 11428.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DMB82_0014580 | C6DBW3 | Positive | 3122292 - 3122762 | 17686.4 |
| peptidoglycan dd-transpeptidase mrda | DMB82_0014585 | P0AD67 | Positive | 3122796 - 3124700 | 71379.0 |
| peptidoglycan glycosyltransferase mrdb | DMB82_0014590 | P0ABG8 | Positive | 3124710 - 3125822 | 40631.8 |
| endolytic peptidoglycan transglycosylase rlpa | DMB82_0014595 | Q8ZDG6 | Positive | 3125836 - 3126957 | 39060.8 |
| d-alanyl-d-alanine carboxypeptidase daca | DMB82_0014600 | P0AEB4 | Positive | 3127124 - 3128335 | 44061.8 |
| duf493 family protein ybed | DMB82_0014605 | C6DBV8 | Positive | 3128485 - 3128748 | 9861.01 |
| lipoyl(octanoyl) transferase lipb | DMB82_0014610 | C6DBV7 | Positive | 3128909 - 3129592 | 25173.6 |
| lipoyl synthase | DMB82_0014615 | C6DBV6 | Positive | 3129820 - 3130785 | 36235.9 |
| sec-independent protein translocase subunit tata | DMB82_0014620 | C6CQJ7 | Negative | 3130868 - 3131065 | 6871.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
