Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aquaticum |
| Strain | A212-S19-A16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1087875 bp
Thymine Count
1088692 bp
Guanine Count
1148674 bp
Cytosine Count
1139184 bp
Genome Length
4464425 bp
Protein-coding Genes
3959 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | DMB82_0012925 | P42106 | Positive | 2754504 - 2755001 | 18443.0 |
| transposase domain-containing protein | DMB82_0012930 | Not Available | Positive | 2755166 - 2756033 | 32425.4 |
| alpa family transcriptional regulator | DMB82_0012935 | P33997 | Positive | 2756172 - 2756366 | 7490.2 |
| duf2857 domain-containing protein | DMB82_0012940 | Not Available | Positive | 2756381 - 2756968 | 21986.6 |
| trar/dksa family transcriptional regulator | DMB82_0012945 | P41065 | Positive | 2756958 - 2757167 | 8232.84 |
| hypothetical protein | DMB82_0012950 | Not Available | Positive | 2757564 - 2757785 | 7905.47 |
| lytic transglycosylase domain-containing protein | DMB82_0012955 | Q2YIT5 | Positive | 2757863 - 2758510 | 23334.9 |
| trbc/virb2 family protein | DMB82_0012960 | Q7WDU3 | Positive | 2758510 - 2758788 | 9824.03 |
| virb3 family type iv secretion system protein | DMB82_0012965 | Q9RPY1 | Positive | 2758800 - 2761547 | 103447.0 |
| type iv secretion system protein | DMB82_0012970 | Not Available | Positive | 2761571 - 2762290 | 26823.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
