Pectobacterium aquaticum A212-S19-A16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium aquaticum A212-S19-A16 is a Gram-negative bacterium characterized by the presence of flagella, which suggests it has motility capabilities. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genome of Pectobacterium aquaticum A212-S19-A16 is accessible under the accession number CP086253.1. As a member of the genus Pectobacterium, this bacterium is likely involved in plant-pathogenic interactions, which may have implications for agricultural practices. The flagella may enhance its ability to colonize plant surfaces or move toward nutrients, highlighting its potential role in plant microbiomes and its interactions within those ecosystems. In ecological terms, the presence of Pectobacterium aquaticum A212-S19-A16 in various habitats may influence the health of plant populations, affecting their growth and yield. Understanding the characteristics of this bacterium can provide insights into its ecological roles and potential management strategies in agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium aquaticum
StrainA212-S19-A16

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium aquaticum A212-S19-A16, Complete Genome

Gene Summary

Adenine Count

1087875 bp

Thymine Count

1088692 bp

Guanine Count

1148674 bp

Cytosine Count

1139184 bp

Genome Length

4464425 bp

Protein-coding Genes

3959 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hcp family type vi secretion system effectorDMB82_0005175Q9HI36Positive1108586 - 110910419061.6
type vi secretion system tip protein vgrgDMB82_0005180E0SAL0Positive1109300 - 111133675043.0
paar domain-containing proteinDMB82_0005185P18952Positive1111346 - 111271946751.7
hypothetical proteinDMB82_0005190Not AvailablePositive1112800 - 111349825737.7
duf4123 domain-containing proteinDMB82_0005195Not AvailablePositive1113658 - 111461437092.0
duf4123 domain-containing proteinDMB82_0005200Not AvailablePositive1114611 - 111552834568.7
duf6531 domain-containing proteinDMB82_0005205E0SGL7Positive1115549 - 1120738193006.0
hypothetical proteinDMB82_0005210Not AvailablePositive1120735 - 112110614658.3
transposase domain-containing proteinDMB82_0005215Not AvailableNegative1121181 - 11213425742.85
endou domain-containing proteinDMB82_0005220E0SGL7Positive1121272 - 112289160917.7

Displaying genes 1081 – 1090 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.