Subdoligranulum variabile BI-114

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum variabile BI-114 is a Gram-positive bacterium that has been characterized as inhabiting the cecum of its host, Gallus gallus (the domestic chicken). This species is notable for possessing a single replicon, which may suggest a streamlined genomic structure that is characteristic of certain bacteria adapted to specific ecological niches. The habitat of the cecum is significant, as it plays a critical role in the digestive processes of chickens, particularly in the fermentation of fibrous materials and the absorption of nutrients. The ability of Subdoligranulum variabile to thrive in this environment indicates its potential contribution to the microbial community and digestive health of its avian host. The taxonomic classification of Subdoligranulum variabile is supported by its accession number CP102293.1, which provides a reference for genetic and genomic studies. This bacterium's presence in the cecum of Gallus gallus highlights its potential role in the gut microbiome, where interactions with other microbial species and the host may influence digestion and nutrient absorption. In summary, Subdoligranulum variabile BI-114 is a Gram-positive bacterium with a single replicon, residing in the cecum of Gallus gallus. Its ecological role in the gut microbiome could be significant for the digestive efficiency and overall health of its avian host, underscoring the importance of microbial diversity in gastrointestinal ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum variabile
StrainBI-114

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcecum
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum variabile BI-114, Complete Genome

Gene Summary

Adenine Count

685001 bp

Thymine Count

680645 bp

Guanine Count

942230 bp

Cytosine Count

937078 bp

Genome Length

3244954 bp

Protein-coding Genes

2930 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cation-translocating p-type atpaseNQ490_12080Q73E41Positive2579770 - 258240994373.2
lrgb family proteinNQ490_12085P94516Negative2582467 - 258316223520.5
cida/lrga family proteinNQ490_12090B7JIF6Negative2583155 - 258351712773.3
hypothetical proteinNQ490_12095Not AvailablePositive2583685 - 258407413344.1
atp phosphoribosyltransferaseNQ490_12100C0QWY0Positive2584221 - 258580158305.8
histidinol dehydrogenaseNQ490_12105P60859Positive2585798 - 258708745960.0
histidinol-phosphate transaminaseNQ490_12110C0R1Z0Positive2587104 - 258817139587.4
imidazole glycerol phosphate synthase subunit hishNQ490_12115B8DA60Positive2588195 - 258881222025.5
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseNQ490_12120C0QWR6Positive2588825 - 258954125798.9
imidazole glycerol phosphate synthase subunit hisfNQ490_12125A3DJF7Positive2589554 - 259031227277.8

Displaying genes 2441 – 2450 of 3082 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.