Subdoligranulum variabile BI-114

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum variabile BI-114 is a Gram-positive bacterium that has been characterized as inhabiting the cecum of its host, Gallus gallus (the domestic chicken). This species is notable for possessing a single replicon, which may suggest a streamlined genomic structure that is characteristic of certain bacteria adapted to specific ecological niches. The habitat of the cecum is significant, as it plays a critical role in the digestive processes of chickens, particularly in the fermentation of fibrous materials and the absorption of nutrients. The ability of Subdoligranulum variabile to thrive in this environment indicates its potential contribution to the microbial community and digestive health of its avian host. The taxonomic classification of Subdoligranulum variabile is supported by its accession number CP102293.1, which provides a reference for genetic and genomic studies. This bacterium's presence in the cecum of Gallus gallus highlights its potential role in the gut microbiome, where interactions with other microbial species and the host may influence digestion and nutrient absorption. In summary, Subdoligranulum variabile BI-114 is a Gram-positive bacterium with a single replicon, residing in the cecum of Gallus gallus. Its ecological role in the gut microbiome could be significant for the digestive efficiency and overall health of its avian host, underscoring the importance of microbial diversity in gastrointestinal ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum variabile
StrainBI-114

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcecum
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum variabile BI-114, Complete Genome

Gene Summary

Adenine Count

685001 bp

Thymine Count

680645 bp

Guanine Count

942230 bp

Cytosine Count

937078 bp

Genome Length

3244954 bp

Protein-coding Genes

2930 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding proteinNQ490_11580Not AvailableNegative2479780 - 24800229673.76
duf378 domain-containing proteinNQ490_11585O32087Positive2480590 - 24808117912.94
ftsw/roda/spove family cell cycle proteinNQ490_11590P07373Negative2480843 - 248200641360.7
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeNQ490_11595O05515Positive2482143 - 248255615065.7
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabNQ490_11600Q87RD1Positive2482610 - 248332325251.3
ribose 5-phosphate isomerase bNQ490_11605P39156Positive2483313 - 248376515987.2
uracil phosphoribosyltransferaseNQ490_11610B0K7G1Positive2483827 - 248445622795.9
crp/fnr family transcriptional regulatorNQ490_11615P29284Negative2484517 - 248518824604.9
4fe-4s binding proteinNQ490_11620O30082Positive2485280 - 248600525687.0
carboxymuconolactone decarboxylase family proteinNQ490_11625P29911Positive2486082 - 248684627556.2

Displaying genes 2341 – 2350 of 3082 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.