Subdoligranulum variabile BI-114

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum variabile BI-114 is a Gram-positive bacterium that has been characterized as inhabiting the cecum of its host, Gallus gallus (the domestic chicken). This species is notable for possessing a single replicon, which may suggest a streamlined genomic structure that is characteristic of certain bacteria adapted to specific ecological niches. The habitat of the cecum is significant, as it plays a critical role in the digestive processes of chickens, particularly in the fermentation of fibrous materials and the absorption of nutrients. The ability of Subdoligranulum variabile to thrive in this environment indicates its potential contribution to the microbial community and digestive health of its avian host. The taxonomic classification of Subdoligranulum variabile is supported by its accession number CP102293.1, which provides a reference for genetic and genomic studies. This bacterium's presence in the cecum of Gallus gallus highlights its potential role in the gut microbiome, where interactions with other microbial species and the host may influence digestion and nutrient absorption. In summary, Subdoligranulum variabile BI-114 is a Gram-positive bacterium with a single replicon, residing in the cecum of Gallus gallus. Its ecological role in the gut microbiome could be significant for the digestive efficiency and overall health of its avian host, underscoring the importance of microbial diversity in gastrointestinal ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum variabile
StrainBI-114

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcecum
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum variabile BI-114


Gene Summary

Adenine Count

685001 bp

Thymine Count

680645 bp

Guanine Count

942230 bp

Cytosine Count

937078 bp

Genome Length

3244954 bp

Protein-coding Genes

2930 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid transport system ii carrier proteinNQ490_09980P54104Positive2127604 - 212894447081.1
had-iia family hydrolaseNQ490_09985P0AF25Negative2129000 - 212984230522.4
glycerophosphodiester phosphodiesteraseNQ490_09990P54527Negative2129839 - 213058227177.8
abc transporter substrate-binding proteinNQ490_09995Q57IS0Negative2130649 - 213206450171.2
carbohydrate abc transporter permeaseNQ490_10000Q8UB30Negative2132145 - 213298430946.3
sugar abc transporter permeaseNQ490_10005Q7CRU3Negative2133074 - 213394331936.7
sn-glycerol-3-phosphate abc transporter atp-binding protein ugpcNQ490_10010P94360Negative2133940 - 213506741630.2
spaa isopeptide-forming pilin-related proteinNQ490_10015Q54C31Negative2135379 - 2138660116424.0
cysteine desulfurase nifsNQ490_10020O54055Positive2138870 - 214006042214.6
fe-s cluster assembly scaffold protein nifuNQ490_10025P0DMG1Positive2140073 - 214051315819.8

Displaying genes 2021 – 2030 of 3082 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.