Subdoligranulum variabile BI-114

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum variabile BI-114 is a Gram-positive bacterium that has been characterized as inhabiting the cecum of its host, Gallus gallus (the domestic chicken). This species is notable for possessing a single replicon, which may suggest a streamlined genomic structure that is characteristic of certain bacteria adapted to specific ecological niches. The habitat of the cecum is significant, as it plays a critical role in the digestive processes of chickens, particularly in the fermentation of fibrous materials and the absorption of nutrients. The ability of Subdoligranulum variabile to thrive in this environment indicates its potential contribution to the microbial community and digestive health of its avian host. The taxonomic classification of Subdoligranulum variabile is supported by its accession number CP102293.1, which provides a reference for genetic and genomic studies. This bacterium's presence in the cecum of Gallus gallus highlights its potential role in the gut microbiome, where interactions with other microbial species and the host may influence digestion and nutrient absorption. In summary, Subdoligranulum variabile BI-114 is a Gram-positive bacterium with a single replicon, residing in the cecum of Gallus gallus. Its ecological role in the gut microbiome could be significant for the digestive efficiency and overall health of its avian host, underscoring the importance of microbial diversity in gastrointestinal ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum variabile
StrainBI-114

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcecum
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum variabile BI-114, Complete Genome

Gene Summary

Adenine Count

685001 bp

Thymine Count

680645 bp

Guanine Count

942230 bp

Cytosine Count

937078 bp

Genome Length

3244954 bp

Protein-coding Genes

2930 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
patatin family proteinNQ490_07680P39407Negative1610717 - 161153830699.9
rrf2 family transcriptional regulatorNQ490_07685P71036Negative1611615 - 161205516261.7
nad-dependent protein deacetylaseNQ490_07690P0DN71Positive1612163 - 161308335566.4
nad-dependent protein deacetylase, sir2 familyNQ490_07695P0DN71Positive1613061 - 161394233762.3
nad-dependent protein deacetylase, sir2 familyNQ490_07700P0DN71Positive1613935 - 161479231967.6
cggc domain-containing proteinNQ490_07705Q58002Positive1614901 - 161525112584.3
metalloregulator arsr/smtb family transcription factorNQ490_07710Q55940Positive1615305 - 161567614041.2
helix-turn-helix transcriptional regulatorNQ490_07715P35319Positive1615689 - 161679241439.5
murr/rpir family transcriptional regulatorNQ490_07720Q8RD36Positive1616761 - 161762132603.2
6-phospho-beta-glucosidaseNQ490_07725P46320Positive1617824 - 161921251951.6

Displaying genes 1561 – 1570 of 3082 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.