Subdoligranulum variabile BI-114

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum variabile BI-114 is a Gram-positive bacterium that has been characterized as inhabiting the cecum of its host, Gallus gallus (the domestic chicken). This species is notable for possessing a single replicon, which may suggest a streamlined genomic structure that is characteristic of certain bacteria adapted to specific ecological niches. The habitat of the cecum is significant, as it plays a critical role in the digestive processes of chickens, particularly in the fermentation of fibrous materials and the absorption of nutrients. The ability of Subdoligranulum variabile to thrive in this environment indicates its potential contribution to the microbial community and digestive health of its avian host. The taxonomic classification of Subdoligranulum variabile is supported by its accession number CP102293.1, which provides a reference for genetic and genomic studies. This bacterium's presence in the cecum of Gallus gallus highlights its potential role in the gut microbiome, where interactions with other microbial species and the host may influence digestion and nutrient absorption. In summary, Subdoligranulum variabile BI-114 is a Gram-positive bacterium with a single replicon, residing in the cecum of Gallus gallus. Its ecological role in the gut microbiome could be significant for the digestive efficiency and overall health of its avian host, underscoring the importance of microbial diversity in gastrointestinal ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum variabile
StrainBI-114

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcecum
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum variabile BI-114, Complete Genome

Gene Summary

Adenine Count

685001 bp

Thymine Count

680645 bp

Guanine Count

942230 bp

Cytosine Count

937078 bp

Genome Length

3244954 bp

Protein-coding Genes

2930 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ig-like domain-containing proteinNQ490_06430P33747Negative1318580 - 132135793782.6
hypothetical proteinNQ490_06435Not AvailableNegative1321569 - 132242930002.5
serine/threonine protein kinaseNQ490_06440Q8XJL8Negative1322548 - 132361237448.6
helix-turn-helix domain-containing proteinNQ490_06445Not AvailableNegative1323609 - 132399213700.6
fructose-bisphosphatase class iiiNQ490_06450A0PYZ1Negative1324059 - 132602974096.2
glycoside hydrolase family 2NQ490_06455Q56307Negative1326013 - 132776765781.8
n-acetyltransferaseNQ490_06460Not AvailableNegative1327789 - 132828917839.3
right-handed parallel beta-helix repeat-containing proteinNQ490_06465Not AvailableNegative1328433 - 1332725151363.0
tyrosine-type recombinase/integraseNQ490_06470Q9KPE9Negative1333142 - 133360617536.7
is200/is605 family transposaseNQ490_06475Not AvailableNegative1333791 - 13339616859.31

Displaying genes 1311 – 1320 of 3082 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.