Sphingomonas rhizophila THG-T61

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas rhizophila THG-T61 is a rod-shaped bacterium that possesses flagella, enabling motility. This species is notable for having a single replicon, which is significant in the context of its genetic organization and replication dynamics. The genomic information for Sphingomonas rhizophila THG-T61 is cataloged under the accession number CP060717.1, providing a reference for further genetic studies. The presence of flagella suggests that Sphingomonas rhizophila THG-T61 may exhibit enhanced adaptability in its environment, allowing it to navigate through various ecological niches. As a member of the Sphingomonadaceae family, this bacterium is likely involved in biogeochemical processes, particularly in soil and plant-associated environments. Understanding the traits of Sphingomonas rhizophila THG-T61, including its shape, motility, and genetic structure, contributes to our knowledge of microbial diversity and functionality. These characteristics may have implications for its role in nutrient cycling and plant interactions, highlighting its potential significance in ecological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas rhizophila
StrainTHG-T61

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas rhizophila THG-T61
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas rhizophila THG-T61


Gene Summary

Adenine Count

443456 bp

Thymine Count

446965 bp

Guanine Count

833954 bp

Cytosine Count

833108 bp

Genome Length

2557483 bp

Protein-coding Genes

2563 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit uvraH9L12_02705O31151Negative558952 - 561885106910.0
atp-dependent dna helicaseH9L12_02710Not AvailableNegative561978 - 56251619614.5
bax inhibitor-1/ycca family proteinH9L12_02715Q9ZE15Positive562639 - 56336726580.3
atp-dependent dna helicaseH9L12_02720Q7DFU6Negative563435 - 56424327940.5
glutathione s-transferase family proteinH9L12_02725P45875Negative564300 - 56493523335.4
m1 family metallopeptidaseH9L12_02730P95928Negative564953 - 56668064863.8
atp-dependent dna helicaseH9L12_02735Not AvailableNegative566680 - 56834657668.2
atp-dependent clp protease atp-binding subunit clpaH9L12_02740P05444Negative568450 - 57080185996.3
duf1192 domain-containing proteinH9L12_02745Not AvailableNegative570878 - 5710757285.61
nad(p)h-quinone oxidoreductaseH9L12_02750Q53FA7Positive571172 - 57214634015.2

Displaying genes 541 – 550 of 2617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.