Sphingomonas rhizophila THG-T61

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas rhizophila THG-T61 is a rod-shaped bacterium that possesses flagella, enabling motility. This species is notable for having a single replicon, which is significant in the context of its genetic organization and replication dynamics. The genomic information for Sphingomonas rhizophila THG-T61 is cataloged under the accession number CP060717.1, providing a reference for further genetic studies. The presence of flagella suggests that Sphingomonas rhizophila THG-T61 may exhibit enhanced adaptability in its environment, allowing it to navigate through various ecological niches. As a member of the Sphingomonadaceae family, this bacterium is likely involved in biogeochemical processes, particularly in soil and plant-associated environments. Understanding the traits of Sphingomonas rhizophila THG-T61, including its shape, motility, and genetic structure, contributes to our knowledge of microbial diversity and functionality. These characteristics may have implications for its role in nutrient cycling and plant interactions, highlighting its potential significance in ecological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas rhizophila
StrainTHG-T61

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas rhizophila THG-T61
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas rhizophila THG-T61, Complete Genome

Gene Summary

Adenine Count

443456 bp

Thymine Count

446965 bp

Guanine Count

833954 bp

Cytosine Count

833108 bp

Genome Length

2557483 bp

Protein-coding Genes

2563 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeH9L12_11650Q2N6I9Negative2280284 - 228156144977.1
yjbe family putative metal transport proteinH9L12_11655O31603Negative2281561 - 228228024988.0
atp-dependent dna helicaseH9L12_11660Q1RIJ6Negative2282402 - 228365646603.0
copd family proteinH9L12_11665Q9ZC85Negative2283845 - 228430617038.3
uroporphyrinogen decarboxylaseH9L12_11670A5VA70Negative2284303 - 228535537861.6
maf-like proteinH9L12_11675Q2GC58Positive2285658 - 228623620925.0
shikimate dehydrogenaseH9L12_11680Q1GP77Positive2286241 - 228706829622.8
dephospho-coa kinaseH9L12_11685P58100Positive2287065 - 228765820822.2
dna polymerase iii subunit epsilonH9L12_11690Q1RJM1Positive2287667 - 228838626459.4
ribosome-associated translation inhibitor raiaH9L12_11695P30334Positive2288439 - 228901420648.4

Displaying genes 2331 – 2340 of 2617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.