Sphingomonas rhizophila THG-T61

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas rhizophila THG-T61 is a rod-shaped bacterium that possesses flagella, enabling motility. This species is notable for having a single replicon, which is significant in the context of its genetic organization and replication dynamics. The genomic information for Sphingomonas rhizophila THG-T61 is cataloged under the accession number CP060717.1, providing a reference for further genetic studies. The presence of flagella suggests that Sphingomonas rhizophila THG-T61 may exhibit enhanced adaptability in its environment, allowing it to navigate through various ecological niches. As a member of the Sphingomonadaceae family, this bacterium is likely involved in biogeochemical processes, particularly in soil and plant-associated environments. Understanding the traits of Sphingomonas rhizophila THG-T61, including its shape, motility, and genetic structure, contributes to our knowledge of microbial diversity and functionality. These characteristics may have implications for its role in nutrient cycling and plant interactions, highlighting its potential significance in ecological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas rhizophila
StrainTHG-T61

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas rhizophila THG-T61
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas rhizophila THG-T61, Complete Genome

Gene Summary

Adenine Count

443456 bp

Thymine Count

446965 bp

Guanine Count

833954 bp

Cytosine Count

833108 bp

Genome Length

2557483 bp

Protein-coding Genes

2563 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sufd family fe-s cluster assembly proteinH9L12_11000Q55792Positive2158728 - 215946825980.6
cysteine desulfuraseH9L12_11005Q9K7A0Positive2159465 - 216065841894.6
suf system fe-s cluster assembly proteinH9L12_11010P70949Positive2160658 - 216111316605.8
iron-sulfur cluster assembly accessory proteinH9L12_11015Q8T3X9Positive2161113 - 216146912470.7
hypothetical proteinH9L12_11020Not AvailablePositive2161538 - 21617959279.49
isoprenylcysteine carboxylmethyltransferase family proteinH9L12_11025Q89V40Positive2161862 - 216261428121.7
s8 family serine peptidaseH9L12_11030P00782Negative2162619 - 216489577060.2
pyrimidine 5'-nucleotidaseH9L12_11035Q09893Positive2165008 - 216567925509.2
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseH9L12_11040Q3SN24Positive2165676 - 216650028738.5
dmt family transporterH9L12_11045O34416Positive2166650 - 216755231815.1

Displaying genes 2201 – 2210 of 2617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.