Sphingomonas rhizophila THG-T61

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas rhizophila THG-T61 is a rod-shaped bacterium that possesses flagella, enabling motility. This species is notable for having a single replicon, which is significant in the context of its genetic organization and replication dynamics. The genomic information for Sphingomonas rhizophila THG-T61 is cataloged under the accession number CP060717.1, providing a reference for further genetic studies. The presence of flagella suggests that Sphingomonas rhizophila THG-T61 may exhibit enhanced adaptability in its environment, allowing it to navigate through various ecological niches. As a member of the Sphingomonadaceae family, this bacterium is likely involved in biogeochemical processes, particularly in soil and plant-associated environments. Understanding the traits of Sphingomonas rhizophila THG-T61, including its shape, motility, and genetic structure, contributes to our knowledge of microbial diversity and functionality. These characteristics may have implications for its role in nutrient cycling and plant interactions, highlighting its potential significance in ecological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas rhizophila
StrainTHG-T61

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas rhizophila THG-T61
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas rhizophila THG-T61, Complete Genome

Gene Summary

Adenine Count

443456 bp

Thymine Count

446965 bp

Guanine Count

833954 bp

Cytosine Count

833108 bp

Genome Length

2557483 bp

Protein-coding Genes

2563 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
large conductance mechanosensitive channel protein msclH9L12_07355Q2G9Z8Positive1445559 - 144598115171.8
Tmrna,resume consensus sequence (at 217): cacaagtgccaacgataaNot AvailableNot AvailablePositive1446080 - 1446429Not Available
hypothetical proteinH9L12_07365Not AvailablePositive1446572 - 14468418982.1
nudix domain-containing proteinH9L12_07370Q7M0H4Positive1446955 - 144770426780.7
extensin family proteinH9L12_07375Not AvailablePositive1447733 - 144844626553.4
hypothetical proteinH9L12_07380Q05024Negative1448534 - 14488039798.85
ld-carboxypeptidaseH9L12_07385O34851Negative1448885 - 144970328932.5
udp-n-acetylmuramate--alanine ligaseH9L12_07390A8LS63Positive1449751 - 145115148540.9
hypothetical proteinH9L12_07395Not AvailablePositive1451158 - 145152913596.0
hypothetical proteinH9L12_07400Q8TCD5Positive1451531 - 145200717799.2

Displaying genes 1471 – 1480 of 2617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.