Lysinimicrobium sediminis HT7-17

ovoid

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Demequinaceae

Genus

Demequina

Description

Lysinimicrobium sediminis HT7-17 is a Gram-positive, ovoid-shaped bacterium. This organism is characterized by a single replicon, which is indicative of its genetic organization. The genome of Lysinimicrobium sediminis is associated with the accession number AP027736.1, providing a reference for further genomic studies and insights into its biological functions. As a member of the Lysinimicrobium genus, this bacterium may play a role in various ecological processes, particularly in sediment environments where it is often isolated. Gram-positive bacteria, including Lysinimicrobium species, are known for their thick peptidoglycan layers, which may confer advantages in specific habitats, such as resilience to environmental stresses. The ecological significance of Lysinimicrobium sediminis HT7-17 could be related to its potential contributions to nutrient cycling and organic matter degradation in sedimentary ecosystems. Its specific traits, such as ovoid morphology and Gram-positive nature, suggest adaptations that may enhance its survival and functional roles in such environments. Thus, Lysinimicrobium sediminis HT7-17 represents an interesting subject for further research into microbial ecology and sedimentary biogeochemistry.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDemequinaceae
GenusDemequina
SpeciesDemequina sediminis
StrainHT7-17

Profile

Physiology
Gram staining propertiesGram-positive
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysinimicrobium sediminis HT7-17, Complete Genome

Gene Summary

Adenine Count

401055 bp

Thymine Count

401370 bp

Guanine Count

950989 bp

Cytosine Count

951985 bp

Genome Length

2705399 bp

Protein-coding Genes

2853 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrolaseGCM10025873_24620P9WGJ3Negative2322552 - 232341831681.8
thioredoxin family proteinGCM10025873_24630P9WKS8Positive2323615 - 23238518685.27
fructose 2,6-bisphosphataseGCM10025873_24640O06391Positive2323871 - 232450022668.9
thiol-disulfide isomeraseGCM10025873_24650P30960Positive2324497 - 232507219355.7
cytochrome c biogenesis protein ccdaGCM10025873_24660Q9KDL8Positive2325069 - 232583326016.0
cytochrome c biogenesis protein resbGCM10025873_24670A5GNE2Positive2325833 - 232745857895.4
c-type cytochrome biogenesis protein ccsbGCM10025873_24680A9BAR6Positive2327455 - 232848937153.0
gdp-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferaseGCM10025873_24690A0QWG6Positive2328493 - 232961739817.0
laci family transcriptional regulatorGCM10025873_24700P37947Negative2329629 - 233062434348.9
sugar abc transporter substrate-binding proteinGCM10025873_24710O32156Positive2330771 - 233211446527.9

Displaying genes 2511 – 2520 of 2908 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.