Lysinimicrobium sediminis HT7-17

ovoid

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Demequinaceae

Genus

Demequina

Description

Lysinimicrobium sediminis HT7-17 is a Gram-positive, ovoid-shaped bacterium. This organism is characterized by a single replicon, which is indicative of its genetic organization. The genome of Lysinimicrobium sediminis is associated with the accession number AP027736.1, providing a reference for further genomic studies and insights into its biological functions. As a member of the Lysinimicrobium genus, this bacterium may play a role in various ecological processes, particularly in sediment environments where it is often isolated. Gram-positive bacteria, including Lysinimicrobium species, are known for their thick peptidoglycan layers, which may confer advantages in specific habitats, such as resilience to environmental stresses. The ecological significance of Lysinimicrobium sediminis HT7-17 could be related to its potential contributions to nutrient cycling and organic matter degradation in sedimentary ecosystems. Its specific traits, such as ovoid morphology and Gram-positive nature, suggest adaptations that may enhance its survival and functional roles in such environments. Thus, Lysinimicrobium sediminis HT7-17 represents an interesting subject for further research into microbial ecology and sedimentary biogeochemistry.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDemequinaceae
GenusDemequina
SpeciesDemequina sediminis
StrainHT7-17

Profile

Physiology
Gram staining propertiesGram-positive
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysinimicrobium sediminis HT7-17, Complete Genome

Gene Summary

Adenine Count

401055 bp

Thymine Count

401370 bp

Guanine Count

950989 bp

Cytosine Count

951985 bp

Genome Length

2705399 bp

Protein-coding Genes

2853 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtp cyclohydrolase 1GCM10025873_17870Q47KU5Negative1689804 - 169037020436.8
atp-dependent zinc metalloprotease ftshGCM10025873_17880C7MC16Negative1690373 - 169244573707.5
hypothetical proteinGCM10025873_17890P44075Negative1692715 - 169313715755.0
hypothetical proteinGCM10025873_17900Not AvailableNegative1693155 - 169348711898.7
hypoxanthine phosphoribosyltransferaseGCM10025873_17910Q839B2Negative1693871 - 169442520118.4
trna(ile)-lysidine synthaseGCM10025873_17920C5BYK3Negative1694422 - 169544435939.3
d-alanyl-d-alanine carboxypeptidaseGCM10025873_17930A0R596Negative1695434 - 169678945455.3
inorganic pyrophosphataseGCM10025873_17940Q9X8I9Positive1696942 - 169746619981.3
hypothetical proteinGCM10025873_17950Q01836Negative1697666 - 169903946646.0
homoserine o-acetyltransferaseGCM10025873_17960Q47L17Positive1699238 - 170043442514.8

Displaying genes 1821 – 1830 of 2908 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.