Lysinimicrobium sediminis HT7-17

ovoid

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Demequinaceae

Genus

Demequina

Description

Lysinimicrobium sediminis HT7-17 is a Gram-positive, ovoid-shaped bacterium. This organism is characterized by a single replicon, which is indicative of its genetic organization. The genome of Lysinimicrobium sediminis is associated with the accession number AP027736.1, providing a reference for further genomic studies and insights into its biological functions. As a member of the Lysinimicrobium genus, this bacterium may play a role in various ecological processes, particularly in sediment environments where it is often isolated. Gram-positive bacteria, including Lysinimicrobium species, are known for their thick peptidoglycan layers, which may confer advantages in specific habitats, such as resilience to environmental stresses. The ecological significance of Lysinimicrobium sediminis HT7-17 could be related to its potential contributions to nutrient cycling and organic matter degradation in sedimentary ecosystems. Its specific traits, such as ovoid morphology and Gram-positive nature, suggest adaptations that may enhance its survival and functional roles in such environments. Thus, Lysinimicrobium sediminis HT7-17 represents an interesting subject for further research into microbial ecology and sedimentary biogeochemistry.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDemequinaceae
GenusDemequina
SpeciesDemequina sediminis
StrainHT7-17

Profile

Physiology
Gram staining propertiesGram-positive
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysinimicrobium sediminis HT7-17, Complete Genome

Gene Summary

Adenine Count

401055 bp

Thymine Count

401370 bp

Guanine Count

950989 bp

Cytosine Count

951985 bp

Genome Length

2705399 bp

Protein-coding Genes

2853 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
k(+)-insensitive pyrophosphate-energized proton pumpGCM10025873_16910Q8KDT8Negative1595470 - 159798388546.9
ribose-phosphate pyrophosphokinaseGCM10025873_16920Q9K3U0Negative1598085 - 159906535177.2
hypothetical proteinGCM10025873_16930A6W6V0Negative1599062 - 159987727543.3
hypothetical proteinGCM10025873_16940A1R4G1Negative1599874 - 160060824822.4
Trna-glnNot AvailableNot AvailablePositive1600731 - 1600805Not Available
tetr family transcriptional regulatorGCM10025873_16950P9WMD8Positive1600782 - 160151026311.5
hypothetical proteinGCM10025873_16960A9WMF7Positive1601574 - 160196913663.7
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseGCM10025873_16970Q47SX2Negative1601977 - 160290931306.4
ribosomal rna small subunit methyltransferase aGCM10025873_16980Q82HC3Negative1602906 - 160376930092.2
hypothetical proteinGCM10025873_16990Not AvailableNegative1603775 - 160450024952.8

Displaying genes 1721 – 1730 of 2908 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.