Lysinimicrobium sediminis HT7-17

ovoid

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Demequinaceae

Genus

Demequina

Description

Lysinimicrobium sediminis HT7-17 is a Gram-positive, ovoid-shaped bacterium. This organism is characterized by a single replicon, which is indicative of its genetic organization. The genome of Lysinimicrobium sediminis is associated with the accession number AP027736.1, providing a reference for further genomic studies and insights into its biological functions. As a member of the Lysinimicrobium genus, this bacterium may play a role in various ecological processes, particularly in sediment environments where it is often isolated. Gram-positive bacteria, including Lysinimicrobium species, are known for their thick peptidoglycan layers, which may confer advantages in specific habitats, such as resilience to environmental stresses. The ecological significance of Lysinimicrobium sediminis HT7-17 could be related to its potential contributions to nutrient cycling and organic matter degradation in sedimentary ecosystems. Its specific traits, such as ovoid morphology and Gram-positive nature, suggest adaptations that may enhance its survival and functional roles in such environments. Thus, Lysinimicrobium sediminis HT7-17 represents an interesting subject for further research into microbial ecology and sedimentary biogeochemistry.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDemequinaceae
GenusDemequina
SpeciesDemequina sediminis
StrainHT7-17

Profile

Physiology
Gram staining propertiesGram-positive
Shapeovoid
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysinimicrobium sediminis HT7-17, Complete Genome

Gene Summary

Adenine Count

401055 bp

Thymine Count

401370 bp

Guanine Count

950989 bp

Cytosine Count

951985 bp

Genome Length

2705399 bp

Protein-coding Genes

2853 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine desulfuraseGCM10025873_10320P63517Negative966421 - 96768943712.1
abc transporter atp-binding proteinGCM10025873_10330P80866Negative967693 - 96833423202.7
non-heme iron oxygenase ferredoxin subunitGCM10025873_10340Q07947Negative968460 - 96881312347.5
fe-s cluster assembly protein sufdGCM10025873_10350P9WFP4Negative968806 - 96984036474.8
fe-s cluster assembly protein sufbGCM10025873_10360P9WFP6Negative969989 - 97141652792.3
hypothetical proteinGCM10025873_10370Not AvailableNegative971419 - 97189516821.2
hypothetical proteinGCM10025873_10380Not AvailableNegative971832 - 9720687696.13
protein required for cytochrome oxidase assemblyGCM10025873_10390Q5HQ52Positive972248 - 97316532483.0
nudix hydrolaseGCM10025873_10400I6X235Negative973184 - 97381023118.1
ctp synthaseGCM10025873_10410A0LUA5Negative973810 - 97540557804.4

Displaying genes 1051 – 1060 of 2908 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.