Polaribacter sp. R2A056_3_33

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter sp. R2A056_3_33 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic organization. The accession number for this strain is CP058984.1, providing a reference for its genomic sequence. The classification of Polaribacter sp. within the broader context of microbial ecology suggests that it may play a role in biogeochemical processes, particularly in polar and subpolar environments where such bacteria are commonly found. Gram-negative bacteria like Polaribacter are often involved in the degradation of organic matter and the cycling of nutrients, which can be critical for maintaining ecosystem balance in their native habitats. The presence of a single replicon is noteworthy as it may influence the bacterium's replication and genetic stability, potentially affecting its adaptability to environmental changes. Overall, Polaribacter sp. R2A056_3_33 represents a specific adaptation to its ecological niche, reflecting the diversity and specialization of microbial life in polar regions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter sp.
StrainR2A056_3_33

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter sp. R2A056_3_33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine; polar sea ice
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter sp. R2A056_3_33, Complete Genome

Gene Summary

Adenine Count

1504963 bp

Thymine Count

1507007 bp

Guanine Count

656922 bp

Cytosine Count

660511 bp

Genome Length

4329403 bp

Protein-coding Genes

3571 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhH0I29_17530A6H0Q2Positive4126387 - 412686018284.6
helix-turn-helix transcriptional regulatorH0I29_17535Q2FK47Negative4126872 - 412805946183.8
non-canonical purine ntp diphosphataseH0I29_17540A5FH89Positive4128546 - 412912721827.9
iron abc transporter permeaseH0I29_17545Q56992Positive4129240 - 413026836621.0
abc transporter atp-binding proteinH0I29_17550Q58283Positive4130318 - 413111830095.8
m28 family peptidaseH0I29_17555P80561Positive4131169 - 413220038747.3
iron-containing alcohol dehydrogenaseH0I29_17560P37686Positive4132398 - 413355240503.3
tetratricopeptide repeat proteinH0I29_17565Q58823Negative4133613 - 413498353201.8
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrH0I29_17570B0JUG8Positive4135178 - 413571720615.1
aspartate carbamoyltransferase catalytic subunitH0I29_17575A0M2G8Positive4135720 - 413664934359.0

Displaying genes 3511 – 3520 of 3662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.