Polaribacter sp. R2A056_3_33

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter sp. R2A056_3_33 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic organization. The accession number for this strain is CP058984.1, providing a reference for its genomic sequence. The classification of Polaribacter sp. within the broader context of microbial ecology suggests that it may play a role in biogeochemical processes, particularly in polar and subpolar environments where such bacteria are commonly found. Gram-negative bacteria like Polaribacter are often involved in the degradation of organic matter and the cycling of nutrients, which can be critical for maintaining ecosystem balance in their native habitats. The presence of a single replicon is noteworthy as it may influence the bacterium's replication and genetic stability, potentially affecting its adaptability to environmental changes. Overall, Polaribacter sp. R2A056_3_33 represents a specific adaptation to its ecological niche, reflecting the diversity and specialization of microbial life in polar regions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter sp.
StrainR2A056_3_33

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter sp. R2A056_3_33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine; polar sea ice
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter sp. R2A056_3_33, Complete Genome

Gene Summary

Adenine Count

1504963 bp

Thymine Count

1507007 bp

Guanine Count

656922 bp

Cytosine Count

660511 bp

Genome Length

4329403 bp

Protein-coding Genes

3571 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deoxyribose-phosphate aldolaseH0I29_16280Not AvailableNegative3862170 - 386291628339.8
ssra-binding protein smpbH0I29_16285A6H0S6Positive3863019 - 386348618179.3
geranylgeranylglycerol-phosphate geranylgeranyltransferaseH0I29_16290Q9UWY6Positive3863525 - 386445435645.4
septum formation protein mafH0I29_16295A5FFP4Positive3864496 - 386507422017.5
carboxypeptidase-like regulatory domain-containing proteinH0I29_16300Not AvailablePositive3865594 - 386639730707.6
prohibitin family proteinH0I29_16305Q54GI9Negative3867030 - 386786030402.0
acyl-coa thioesteraseH0I29_16310Q89AL4Negative3867988 - 386837714792.0
vwa domain-containing proteinH0I29_16315Not AvailableNegative3868392 - 387026071386.4
eama family transporterH0I29_16320P0AA72Negative3870627 - 387154734053.0
hypothetical proteinH0I29_16325P0ADJ8Negative3871699 - 387218718124.2

Displaying genes 3261 – 3270 of 3662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.