Polaribacter sp. R2A056_3_33

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter sp. R2A056_3_33 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic organization. The accession number for this strain is CP058984.1, providing a reference for its genomic sequence. The classification of Polaribacter sp. within the broader context of microbial ecology suggests that it may play a role in biogeochemical processes, particularly in polar and subpolar environments where such bacteria are commonly found. Gram-negative bacteria like Polaribacter are often involved in the degradation of organic matter and the cycling of nutrients, which can be critical for maintaining ecosystem balance in their native habitats. The presence of a single replicon is noteworthy as it may influence the bacterium's replication and genetic stability, potentially affecting its adaptability to environmental changes. Overall, Polaribacter sp. R2A056_3_33 represents a specific adaptation to its ecological niche, reflecting the diversity and specialization of microbial life in polar regions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter sp.
StrainR2A056_3_33

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter sp. R2A056_3_33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine; polar sea ice
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter sp. R2A056_3_33, Complete Genome

Gene Summary

Adenine Count

1504963 bp

Thymine Count

1507007 bp

Guanine Count

656922 bp

Cytosine Count

660511 bp

Genome Length

4329403 bp

Protein-coding Genes

3571 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ybbr-like domain-containing proteinH0I29_13980Not AvailablePositive3322088 - 332302635356.2
dephospho-coa kinaseH0I29_13985Q89YY6Positive3323028 - 332362422586.4
hamp domain-containing histidine kinaseH0I29_13990Q08408Positive3323728 - 332529660391.6
response regulator transcription factorH0I29_13995Q9AE24Positive3325307 - 332600826765.5
threonylcarbamoyl-amp synthaseH0I29_14000P0AFR5Positive3326083 - 332670323013.8
srpbcc family proteinH0I29_14005Not AvailablePositive3326703 - 332719118649.7
glycosyltransferase family 2 proteinH0I29_14010P9WMY2Negative3327183 - 332818138222.9
type i restriction enzyme hsdr n-terminal domain-containing proteinH0I29_14015Not AvailableNegative3328334 - 332877717677.6
dna polymerase iii subunit deltaH0I29_14020P54459Positive3328795 - 332979638290.7
duf1569 domain-containing proteinH0I29_14025Not AvailablePositive3329798 - 333025017409.0

Displaying genes 2801 – 2810 of 3662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.