Polaribacter sp. R2A056_3_33

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter sp. R2A056_3_33 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic organization. The accession number for this strain is CP058984.1, providing a reference for its genomic sequence. The classification of Polaribacter sp. within the broader context of microbial ecology suggests that it may play a role in biogeochemical processes, particularly in polar and subpolar environments where such bacteria are commonly found. Gram-negative bacteria like Polaribacter are often involved in the degradation of organic matter and the cycling of nutrients, which can be critical for maintaining ecosystem balance in their native habitats. The presence of a single replicon is noteworthy as it may influence the bacterium's replication and genetic stability, potentially affecting its adaptability to environmental changes. Overall, Polaribacter sp. R2A056_3_33 represents a specific adaptation to its ecological niche, reflecting the diversity and specialization of microbial life in polar regions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter sp.
StrainR2A056_3_33

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter sp. R2A056_3_33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine; polar sea ice
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter sp. R2A056_3_33, Complete Genome

Gene Summary

Adenine Count

1504963 bp

Thymine Count

1507007 bp

Guanine Count

656922 bp

Cytosine Count

660511 bp

Genome Length

4329403 bp

Protein-coding Genes

3571 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylglyoxal synthaseH0I29_12980A0PZH3Positive3089721 - 309008913181.3
rida family proteinH0I29_12985O58584Negative3090082 - 309046213729.4
lps-assembly protein lptdH0I29_12990Q07YK1Negative3090626 - 309328699734.2
n-acetylmuramoyl-l-alanine amidaseH0I29_12995P36548Positive3093380 - 309447140720.9
mce family proteinH0I29_13000Not AvailablePositive3094526 - 309549735597.5
(fe-s)-binding proteinH0I29_13005P45866Positive3095521 - 309683749723.7
(fe-s)-binding proteinH0I29_13010P45866Positive3097024 - 309780328726.7
nad(p)h-dependent oxidoreductaseH0I29_13015Not AvailablePositive3097818 - 309833019823.5
ph domain-containing proteinH0I29_13020P96616Positive3098323 - 309982258157.4
1,4-dihydroxy-2-naphthoate octaprenyltransferaseH0I29_13025P32166Positive3099813 - 310072433287.2

Displaying genes 2601 – 2610 of 3662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.