Polaribacter sp. R2A056_3_33

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter sp. R2A056_3_33 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic organization. The accession number for this strain is CP058984.1, providing a reference for its genomic sequence. The classification of Polaribacter sp. within the broader context of microbial ecology suggests that it may play a role in biogeochemical processes, particularly in polar and subpolar environments where such bacteria are commonly found. Gram-negative bacteria like Polaribacter are often involved in the degradation of organic matter and the cycling of nutrients, which can be critical for maintaining ecosystem balance in their native habitats. The presence of a single replicon is noteworthy as it may influence the bacterium's replication and genetic stability, potentially affecting its adaptability to environmental changes. Overall, Polaribacter sp. R2A056_3_33 represents a specific adaptation to its ecological niche, reflecting the diversity and specialization of microbial life in polar regions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter sp.
StrainR2A056_3_33

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter sp. R2A056_3_33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine; polar sea ice
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter sp. R2A056_3_33, Complete Genome

Gene Summary

Adenine Count

1504963 bp

Thymine Count

1507007 bp

Guanine Count

656922 bp

Cytosine Count

660511 bp

Genome Length

4329403 bp

Protein-coding Genes

3571 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-alaNot AvailableNot AvailablePositive2907567 - 2907640Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive2907813 - 2910700Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive2910808 - 2910917Not Available
hypothetical proteinH0I29_12195Not AvailableNegative2911937 - 291280332873.4
susd/ragb family nutrient-binding outer membrane lipoproteinH0I29_12200Not AvailableNegative2912836 - 291470770108.2
susc/raga family tonb-linked outer membrane proteinH0I29_12205T2KM18Negative2914714 - 2917794112877.0
bcct family transporterH0I29_12210P45335Negative2918604 - 292060775827.3
type ix secretion system protein porqH0I29_12215Not AvailablePositive2921153 - 292217537607.6
(d)cmp kinaseH0I29_12220A5FG91Positive2922177 - 292286926108.5
7-carboxy-7-deazaguanine synthase queeH0I29_12225A6H1N2Negative2923076 - 292370523895.7

Displaying genes 2441 – 2450 of 3662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.