Thioclava nitratireducens 25B10_4

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava nitratireducens 25B10_4 is a Gram-negative, rod-shaped bacterium characterized by its ability to reduce nitrate. This organism has a unique genomic structure, featuring three distinct replicons, which may contribute to its adaptability and metabolic versatility. The genomic information for Thioclava nitratireducens is accessible through several nucleotide sequence accessions: CP019437.1, CP019438.1, and CP019439.1. These accessions indicate the presence of a well-characterized genome that can facilitate further research into its genetic and biochemical pathways. As a Gram-negative bacterium, Thioclava nitratireducens possesses a double membrane structure, which is typical of this group, potentially influencing its interactions with the environment and resistance to certain antimicrobial agents. The rod shape of the bacterium may also play a role in its motility and ability to colonize different ecological niches. In summary, the traits of Thioclava nitratireducens 25B10_4 underscore its significance in the microbial community, especially in nitrate reduction processes. This capability is crucial in biogeochemical cycles, particularly in environments where nitrate is a key electron acceptor. Understanding the genomic and phenotypic characteristics of this bacterium could provide insights into its ecological role and potential applications in bioremediation or nutrient cycling in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava nitratireducens
Strain25B10_4

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava nitratireducens 25B10_4, Complete Genome

Gene Summary

Adenine Count

704895 bp

Thymine Count

702161 bp

Guanine Count

1249106 bp

Cytosine Count

1254519 bp

Genome Length

3910681 bp

Protein-coding Genes

3695 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-hydroxy-acid oxidizing enzymeBMG03_06480Q7VPI9Negative1303929 - 130509242594.3
zip family metal transporterBMG03_06485Q06916Positive1305247 - 130599325313.1
acetylornithine transaminaseBMG03_06490P30900Positive1306216 - 130739441301.7
ornithine carbamoyltransferaseBMG03_06495A3PHL6Positive1307483 - 130840934107.7
yiha family ribosome biogenesis gtp-binding proteinBMG03_06500Q1GJX8Negative1308431 - 130908123636.6
hypothetical proteinBMG03_06505Q58EJ9Negative1309081 - 130984828891.6
membrane protein insertase yidcBMG03_06510A1B0E4Negative1309845 - 131169268302.4
hypothetical proteinBMG03_06515Q9I310Negative1311860 - 131347958205.8
trna 2-thiocytidine(32) synthetase ttcaBMG03_06520Q3IYY8Negative1313561 - 131444233566.5
membrane protein insertion efficiency factor yiddBMG03_06525A3PNA8Negative1314435 - 131472510425.4

Displaying genes 1331 – 1340 of 4135 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.