Lactococcus garvieae subsp. garvieae YT-3

Coccifacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Lactococcus

Description

Lactococcus garvieae subsp. garvieae YT-3 is a Gram-positive bacterium characterized by its cocci shape and facultative anaerobic oxygen requirement. This species is notable for its ability to thrive in both aerobic and anaerobic conditions, which may contribute to its adaptability in various environments. The organism possesses true flagella, a feature that could potentially aid in motility, although the specific implications of flagella presence in this subspecies have not been detailed. Lactococcus garvieae subsp. garvieae YT-3 has a single replicon, indicating a streamlined genetic organization that may be advantageous in terms of replication and cellular function. The genomic information of this subspecies is accessible through the accession number AP009332.1, which provides a reference point for studies involving its genetic and phenotypic characteristics. From a biological perspective, the facultative anaerobic nature and the presence of flagella suggest that Lactococcus garvieae subsp. garvieae YT-3 could occupy various ecological niches, including environments where oxygen levels fluctuate. This adaptability may play a significant role in its survival and potential interactions within microbial communities. Understanding these traits provides insights into the ecological roles that such microorganisms may fulfill in diverse habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusLactococcus
SpeciesLactococcus garvieae
StrainYT-3

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lactococcus garvieae subsp. garvieae YT-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactococcus garvieae subsp. garvieae YT-3


Gene Summary

Adenine Count

594912 bp

Thymine Count

598047 bp

Guanine Count

377592 bp

Cytosine Count

379584 bp

Genome Length

1950135 bp

Protein-coding Genes

1852 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component sensor kinaseLCGT_0430Q4L6C5Positive445958 - 44744856756.9
amino acid abc transporter substrate-binding componentLCGT_0431P0AEQ8Positive447845 - 44941657475.8
amino acid abc transporter atp-binding componentLCGT_0432P54537Positive449417 - 45015426907.8
udp-n-acetylmuramoylalanine d-glutamate ligaseLCGT_0433Q02XX9Positive450293 - 45165449402.9
udp-n-acetylglucosamine:lps n-acetylglucosamine transferaseLCGT_0434Q9CF92Positive451656 - 45275039420.5
cell division protein ftsqLCGT_0435Q9CF93Positive452750 - 45378739595.8
glutamine abc transporter atp-binding componentLCGT_0436P54537Negative453883 - 45462027168.1
glutamine abc transporter permease and substrate-binding componentsLCGT_0437P0AEQ5Negative454634 - 45677878336.6
conserved hypothetical proteinLCGT_0438P0ABP7Positive457017 - 45767324298.6
shikimate 5-dehydrogenaseLCGT_0439A2RMH6Positive457746 - 45861232139.2

Displaying genes 571 – 580 of 2035 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.