Polaribacter haliotis RA4-7

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter haliotis RA4-7 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses two replicons, which indicates a complex genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accessions CP061813.1 and CP150663.1, providing a basis for its genomic analysis and identification. The distinction of being Gram-negative suggests that P. haliotis RA4-7 has a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which can influence its interactions with other microorganisms and its environmental resilience. The rod shape may also play a role in its motility and nutrient uptake, enhancing its ability to thrive in diverse ecological niches. Understanding the genomic features of Polaribacter haliotis RA4-7, particularly its two replicons, may provide insights into its metabolic capabilities and potential biotechnological applications. The presence of multiple replicons can allow for greater genetic flexibility and the potential for horizontal gene transfer, which could enhance the organism's survival in changing environments. From a biological and ecological perspective, the traits of Polaribacter haliotis RA4-7 highlight its potential role in marine ecosystems, where its adaptability and interactions with other microbial communities can influence nutrient cycling and overall ecosystem health. The study of this bacterium could contribute to a deeper understanding of microbial dynamics in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter haliotis
StrainRA4-7

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter haliotis RA4-7
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter haliotis RA4-7, Complete Genome

Gene Summary

Adenine Count

1335044 bp

Thymine Count

1327558 bp

Guanine Count

569356 bp

Cytosine Count

568668 bp

Genome Length

3800626 bp

Protein-coding Genes

3181 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporterH9I45_00470B1VU78Positive155952 - 15638615822.2
ragb/susd family nutrient uptake outer membrane proteinH9I45_00475T2KN63Negative156766 - 15809747457.8
susc/raga family tonb-linked outer membrane proteinH9I45_00480T2KPJ3Negative158109 - 161354117204.0
d-galactonate dehydratase family proteinH9I45_00485C6D9S0Negative161712 - 16292946017.4
transporterH9I45_00490P96169Negative162930 - 16469365902.8
hypothetical proteinH9I45_00495Q8S340Negative164819 - 16564931564.5
transporterH9I45_00500Q5E733Negative165681 - 16742063859.3
gfo/idh/moca family oxidoreductaseH9I45_00505P74041Negative167433 - 16857242654.9
fadr family transcriptional regulatorH9I45_00510O07007Negative168737 - 16942925855.6
fadr family transcriptional regulatorH9I45_00515O07007Negative169604 - 17030526620.5

Displaying genes 151 – 160 of 6518 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.