Polaribacter haliotis RA4-7

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter haliotis RA4-7 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses two replicons, which indicates a complex genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accessions CP061813.1 and CP150663.1, providing a basis for its genomic analysis and identification. The distinction of being Gram-negative suggests that P. haliotis RA4-7 has a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which can influence its interactions with other microorganisms and its environmental resilience. The rod shape may also play a role in its motility and nutrient uptake, enhancing its ability to thrive in diverse ecological niches. Understanding the genomic features of Polaribacter haliotis RA4-7, particularly its two replicons, may provide insights into its metabolic capabilities and potential biotechnological applications. The presence of multiple replicons can allow for greater genetic flexibility and the potential for horizontal gene transfer, which could enhance the organism's survival in changing environments. From a biological and ecological perspective, the traits of Polaribacter haliotis RA4-7 highlight its potential role in marine ecosystems, where its adaptability and interactions with other microbial communities can influence nutrient cycling and overall ecosystem health. The study of this bacterium could contribute to a deeper understanding of microbial dynamics in marine habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter haliotis
StrainRA4-7

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter haliotis RA4-7
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter haliotis RA4-7, Complete Genome

Gene Summary

Adenine Count

1335044 bp

Thymine Count

1327558 bp

Guanine Count

569356 bp

Cytosine Count

568668 bp

Genome Length

3800626 bp

Protein-coding Genes

3181 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3781 domain-containing proteinH9I45_00370Not AvailablePositive131439 - 13169910098.3
fad-dependent oxidoreductaseH9I45_00375A3KEZ1Positive131696 - 13294345949.5
aminopeptidase p family proteinH9I45_00380O31689Positive132947 - 13416145638.8
alpha-ketoglutarate-dependent dioxygenase alkbH9I45_00385Q58DM4Positive134207 - 13480923340.2
23s rrna pseudouridine(2604) synthase rlufH9I45_00390Q8Z1V3Positive134843 - 13573033614.6
trna guanosine(34) transglycosylase tgtH9I45_00395Q8RAM9Positive136045 - 13717543013.9
lptf/lptg family permeaseH9I45_00400Not AvailablePositive137244 - 13833541938.3
dmt family transporterH9I45_00405Not AvailablePositive138322 - 13923634838.3
acetyl-coa carboxylase carboxyltransferase subunit alphaH9I45_00410A5FNY7Positive139310 - 14026335740.2
family 43 glycosylhydrolaseH9I45_00415Not AvailablePositive140516 - 14164943345.6

Displaying genes 131 – 140 of 6518 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.