Lachnoclostridium phocaeense

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Lachnoclostridium phocaeense is a Gram-positive, rod-shaped bacterium primarily found in the cecal contents of certain organisms. This species is characterized by its motility, as it possesses flagella, which facilitates movement within its habitat. The genomic structure of L. phocaeense is defined by a single replicon, indicating a relatively simple genetic organization. The identification of L. phocaeense is supported by the accession number LT635479.1, which provides a reference for its genetic sequencing and classification within microbial databases. This bacterium's presence in the cecal contents suggests its potential role in the digestive processes of the host organisms, likely contributing to the fermentation of dietary components and the maintenance of gut health. The ecological insight drawn from the habitat of L. phocaeense indicates its involvement in the complex microbial ecosystem of the gut, where it may engage in interactions with other microbial species. Such interactions can influence nutrient availability and overall gut function. Understanding the specific roles of Lachnoclostridium phocaeense in its environment could provide valuable information regarding gut microbiota dynamics and their implications for host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
SpeciesLachnoclostridium phocaeense
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lachnoclostridium phocaeense
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcecal contents
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnoclostridium phocaeense , Complete Genome

Gene Summary

Adenine Count

859748 bp

Thymine Count

868833 bp

Guanine Count

882823 bp

Cytosine Count

889349 bp

Genome Length

3500754 bp

Protein-coding Genes

3262 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical protein-O32095Negative2877339 - 287851743562.8
hypothetical protein-Q8Y8Q5Negative2878519 - 288105391762.9
hypothetical protein-O34383Positive2881430 - 288289654006.1
Trna-lysNot AvailableNot AvailablePositive2882953 - 2883025Not Available
Trna-pheNot AvailableNot AvailablePositive2883051 - 2883123Not Available
Trna-metNot AvailableNot AvailablePositive2883128 - 2883201Not Available
Trna-thrNot AvailableNot AvailablePositive2883231 - 2883303Not Available
Trna-tyrNot AvailableNot AvailablePositive2883311 - 2883392Not Available
Trna-valNot AvailableNot AvailablePositive2883399 - 2883471Not Available
Trna-aspNot AvailableNot AvailablePositive2883477 - 2883550Not Available

Displaying genes 2761 – 2770 of 3338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.