Agromyces mangrovi HIr16-25

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Agromyces

Description

Agromyces mangrovi HIr16-25 is a Gram-positive bacterium characterized by its rod shape. It contains a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession number AP027737.1, allowing for further reference and study within microbial databases. The classification of Agromyces mangrovi within the genus Agromyces suggests that it may play a role in soil ecology, particularly in mangrove ecosystems where it was likely isolated. As a member of the Agromyces genus, this bacterium is expected to contribute to nutrient cycling and potentially interact with other soil microorganisms, aiding in the degradation of organic matter. Understanding the traits of Agromyces mangrovi HIr16-25 can provide insight into its ecological function, particularly in mangrove habitats, where microbial communities are crucial for maintaining the health and stability of these unique environments. The single replicon may also suggest a streamlined genetic framework that could be advantageous for survival in the dynamic conditions often found in mangrove ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAgromyces
SpeciesAgromyces mangrovi (ex Wang et al. 2018)
StrainHIr16-25

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agromyces mangrovi HIr16-25, Complete Genome

Gene Summary

Adenine Count

504771 bp

Thymine Count

511666 bp

Guanine Count

1301449 bp

Cytosine Count

1295920 bp

Genome Length

3613806 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphataseGCM10025877_09540Not AvailablePositive1002914 - 100502274429.5
hypothetical proteinGCM10025877_09550O30875Negative1005143 - 10052985538.38
fatty acid desaturaseGCM10025877_09560Q43469Negative1005489 - 100669445012.8
udp-glucose 4-epimeraseGCM10025877_09570Q56093Positive1006719 - 100755530765.7
hypothetical proteinGCM10025877_09580P12752Negative1007582 - 100843028285.5
rna polymerase sigma factor sigkGCM10025877_09590A1TEV0Negative1008427 - 100901421213.3
upf0721 transmembrane proteinGCM10025877_09600O05493Positive1009128 - 100994327526.6
polyisoprenoid-binding proteinGCM10025877_09610Q7A339Positive1010028 - 101060320724.4
hypothetical proteinGCM10025877_09620Not AvailableNegative1010657 - 101108213647.9
alpha/beta hydrolaseGCM10025877_09630Q3TUU5Positive1011183 - 101184823415.7

Displaying genes 981 – 990 of 3542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.