Agromyces mangrovi HIr16-25

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Agromyces

Description

Agromyces mangrovi HIr16-25 is a Gram-positive bacterium characterized by its rod shape. It contains a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession number AP027737.1, allowing for further reference and study within microbial databases. The classification of Agromyces mangrovi within the genus Agromyces suggests that it may play a role in soil ecology, particularly in mangrove ecosystems where it was likely isolated. As a member of the Agromyces genus, this bacterium is expected to contribute to nutrient cycling and potentially interact with other soil microorganisms, aiding in the degradation of organic matter. Understanding the traits of Agromyces mangrovi HIr16-25 can provide insight into its ecological function, particularly in mangrove habitats, where microbial communities are crucial for maintaining the health and stability of these unique environments. The single replicon may also suggest a streamlined genetic framework that could be advantageous for survival in the dynamic conditions often found in mangrove ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAgromyces
SpeciesAgromyces mangrovi (ex Wang et al. 2018)
StrainHIr16-25

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agromyces mangrovi HIr16-25, Complete Genome

Gene Summary

Adenine Count

504771 bp

Thymine Count

511666 bp

Guanine Count

1301449 bp

Cytosine Count

1295920 bp

Genome Length

3613806 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
choline transporterGCM10025877_02690Q8NN75Negative291090 - 29306369223.2
nitrilaseGCM10025877_02700Q5QGZ8Negative293166 - 29410134238.9
hypothetical proteinGCM10025877_02710Not AvailablePositive294293 - 29463412781.9
hypothetical proteinGCM10025877_02720Not AvailableNegative294643 - 29509215476.8
hypothetical proteinGCM10025877_02730Not AvailableNegative295092 - 29555015701.1
hypothetical proteinGCM10025877_02740Not AvailableNegative295547 - 29589111447.9
hypothetical proteinGCM10025877_02750Not AvailableNegative295945 - 2961125932.46
pilus assembly protein tadbGCM10025877_02760Not AvailableNegative296188 - 29711732121.8
type ii secretion system protein fGCM10025877_02770Not AvailableNegative297114 - 29798930403.5
pilus assembly protein cpafGCM10025877_02780P9WMT2Negative297986 - 29921544408.2

Displaying genes 281 – 290 of 3542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.