Agromyces mangrovi HIr16-25

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Agromyces

Description

Agromyces mangrovi HIr16-25 is a Gram-positive bacterium characterized by its rod shape. It contains a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession number AP027737.1, allowing for further reference and study within microbial databases. The classification of Agromyces mangrovi within the genus Agromyces suggests that it may play a role in soil ecology, particularly in mangrove ecosystems where it was likely isolated. As a member of the Agromyces genus, this bacterium is expected to contribute to nutrient cycling and potentially interact with other soil microorganisms, aiding in the degradation of organic matter. Understanding the traits of Agromyces mangrovi HIr16-25 can provide insight into its ecological function, particularly in mangrove habitats, where microbial communities are crucial for maintaining the health and stability of these unique environments. The single replicon may also suggest a streamlined genetic framework that could be advantageous for survival in the dynamic conditions often found in mangrove ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAgromyces
SpeciesAgromyces mangrovi (ex Wang et al. 2018)
StrainHIr16-25

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agromyces mangrovi HIr16-25, Complete Genome

Gene Summary

Adenine Count

504771 bp

Thymine Count

511666 bp

Guanine Count

1301449 bp

Cytosine Count

1295920 bp

Genome Length

3613806 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinGCM10025877_25530Not AvailablePositive2672377 - 267308426074.6
glycerate kinaseGCM10025877_25540P42100Positive2673081 - 267422337030.6
putative multidrug resistance transporter, bcr/cfla family proteinGCM10025877_25550P96709Positive2674463 - 267573744431.6
hypothetical proteinGCM10025877_25560P80143Positive2675765 - 267646624677.2
cysteine desulfuraseGCM10025877_25570P63517Positive2676427 - 267780947810.6
iron-sulfur cluster assembly scaffold protein nifuGCM10025877_25580Q9A1G2Positive2677806 - 267826116370.2
xylitol oxidaseGCM10025877_25590Q9KX73Positive2678279 - 267955044923.0
hypothetical proteinGCM10025877_25600Not AvailablePositive2679567 - 268038829391.4
o-succinylbenzoate synthaseGCM10025877_25610Q44244Positive2680528 - 268144532193.3
hypothetical proteinGCM10025877_25620P95251Negative2681497 - 268272043671.9

Displaying genes 2591 – 2600 of 3542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.