Agromyces mangrovi HIr16-25

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Agromyces

Description

Agromyces mangrovi HIr16-25 is a Gram-positive bacterium characterized by its rod shape. It contains a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession number AP027737.1, allowing for further reference and study within microbial databases. The classification of Agromyces mangrovi within the genus Agromyces suggests that it may play a role in soil ecology, particularly in mangrove ecosystems where it was likely isolated. As a member of the Agromyces genus, this bacterium is expected to contribute to nutrient cycling and potentially interact with other soil microorganisms, aiding in the degradation of organic matter. Understanding the traits of Agromyces mangrovi HIr16-25 can provide insight into its ecological function, particularly in mangrove habitats, where microbial communities are crucial for maintaining the health and stability of these unique environments. The single replicon may also suggest a streamlined genetic framework that could be advantageous for survival in the dynamic conditions often found in mangrove ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAgromyces
SpeciesAgromyces mangrovi (ex Wang et al. 2018)
StrainHIr16-25

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agromyces mangrovi HIr16-25, Complete Genome

Gene Summary

Adenine Count

504771 bp

Thymine Count

511666 bp

Guanine Count

1301449 bp

Cytosine Count

1295920 bp

Genome Length

3613806 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative transcriptional regulatory protein tetrGCM10025877_11640P9WMB6Positive1223287 - 122392524555.4
hypothetical proteinGCM10025877_11650P46371Positive1223922 - 122448519736.4
hypothetical proteinGCM10025877_11660P46371Positive1224476 - 122559138676.4
luciferaseGCM10025877_11670Q58929Negative1225624 - 122650831007.7
hypothetical proteinGCM10025877_11680Q9LUW6Negative1226561 - 122871181020.0
hypothetical proteinGCM10025877_11690Q0P5B7Positive1229227 - 123031837150.5
marr family transcriptional regulatorGCM10025877_11700O34777Negative1230326 - 123075415590.0
hypothetical proteinGCM10025877_11710Not AvailablePositive1230819 - 12310347783.45
short-chain dehydrogenaseGCM10025877_11720P37694Negative1231317 - 123215028776.7
sarp family transcriptional regulatorGCM10025877_11730P9WMG0Positive1232274 - 1235315106979.0

Displaying genes 1191 – 1200 of 3542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.