Skermanella rosea M1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Skermanella

Description

Skermanella rosea M1 is characterized as a Gram-negative, rod-shaped bacterium. This organism possesses a total of seven replicons, indicating a potentially complex genetic organization. The genomic data of Skermanella rosea M1 is cataloged under several accessions, specifically CP086111.1, CP086112.1, CP086113.1, CP086114.1, CP086115.1, CP086116.1, and CP086117.1, which collectively contribute to understanding its genetic makeup. The Gram-negative classification suggests that Skermanella rosea M1 has a distinctive cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature is significant, as it often influences the bacterium's interactions with its environment, including resistance to certain antibiotics and its role in various ecological niches. From an ecological perspective, the traits of Skermanella rosea M1 may indicate its adaptability to different environments, potentially allowing it to thrive in diverse habitats. The presence of multiple replicons could suggest a versatile metabolic capacity, which may enable the organism to utilize various substrates for growth, thus playing a role in nutrient cycling. Overall, the characteristics of Skermanella rosea M1 provide insight into its potential ecological roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusSkermanella
SpeciesSkermanella rosea
StrainM1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Skermanella rosea M1, Complete Genome

Gene Summary

Adenine Count

983742 bp

Thymine Count

981857 bp

Guanine Count

2070498 bp

Cytosine Count

2062534 bp

Genome Length

6098631 bp

Protein-coding Genes

5647 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrogenase maturation nickel metallochaperone hypaJL101_018905Q0A726Positive4048740 - 404907211658.1
hydrogenase nickel incorporation protein hypbJL101_018910P0AAN4Positive4049072 - 404991729860.5
carbamoyltransferase hypfJL101_018915O07451Positive4049921 - 405217078962.4
hypc/hybg/hupf family hydrogenase formation chaperoneJL101_018920P31900Positive4052180 - 40524378919.59
hydrogenase formation protein hypdJL101_018925P40598Positive4052434 - 405357941707.2
hydrogenase expression/formation protein hypeJL101_018930P40595Positive4053588 - 405463736329.6
crp/fnr family transcriptional regulatorJL101_018935A5F890Positive4054652 - 405535926266.8
endonuclease domain-containing proteinJL101_018940P45736Positive4055359 - 405569713177.6
is4 family transposaseJL101_018945Q46731Negative4055753 - 405704247759.3
formyltetrahydrofolate deformylaseJL101_018950Q46339Negative4057299 - 405815332205.7

Displaying genes 3781 – 3790 of 7309 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.