Skermanella rosea M1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Skermanella

Description

Skermanella rosea M1 is characterized as a Gram-negative, rod-shaped bacterium. This organism possesses a total of seven replicons, indicating a potentially complex genetic organization. The genomic data of Skermanella rosea M1 is cataloged under several accessions, specifically CP086111.1, CP086112.1, CP086113.1, CP086114.1, CP086115.1, CP086116.1, and CP086117.1, which collectively contribute to understanding its genetic makeup. The Gram-negative classification suggests that Skermanella rosea M1 has a distinctive cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature is significant, as it often influences the bacterium's interactions with its environment, including resistance to certain antibiotics and its role in various ecological niches. From an ecological perspective, the traits of Skermanella rosea M1 may indicate its adaptability to different environments, potentially allowing it to thrive in diverse habitats. The presence of multiple replicons could suggest a versatile metabolic capacity, which may enable the organism to utilize various substrates for growth, thus playing a role in nutrient cycling. Overall, the characteristics of Skermanella rosea M1 provide insight into its potential ecological roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusSkermanella
SpeciesSkermanella rosea
StrainM1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Skermanella rosea M1, Complete Genome

Gene Summary

Adenine Count

983742 bp

Thymine Count

981857 bp

Guanine Count

2070498 bp

Cytosine Count

2062534 bp

Genome Length

6098631 bp

Protein-coding Genes

5647 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter substrate-binding proteinJL101_011655Q3J1R2Negative2539315 - 254044841456.7
ycei family proteinJL101_011660C6DKU8Negative2540775 - 254140723159.5
dna-3-methyladenine glycosylase 2 family proteinJL101_011665Q92383Negative2541449 - 254212324873.2
phosphoribosylformylglycinamidine synthase subunit pursJL101_011670P12049Negative2542120 - 25423628727.55
phosphoribosylaminoimidazolesuccinocarboxamide synthaseJL101_011675B6IWP6Negative2542394 - 254315829235.3
nrde family proteinJL101_011680Not AvailableNegative2543310 - 254406527137.1
duf1476 domain-containing proteinJL101_011685Not AvailablePositive2544174 - 254449412429.7
adenylosuccinate lyaseJL101_011690P12047Negative2544568 - 254586347852.3
csbd family proteinJL101_011695Q983T9Positive2546039 - 25462035750.87
response regulatorJL101_011700Q9A5I5Negative2546229 - 254742242495.4

Displaying genes 2331 – 2340 of 7309 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.