Sphingomonas panacisoli HKS19

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas panacisoli HKS19 is a rod-shaped bacterium characterized by the presence of flagella, which suggests it possesses motility. This motility may contribute to its ecological adaptability in various environments. The organism is noted to have a single replicon, indicating a streamlined genetic structure that may reflect its evolutionary adaptations. The complete genome of Sphingomonas panacisoli HKS19 is accessible under the accession number CP042306.1, which provides a resource for further genomic and functional studies. This genomic information can be critical for understanding the metabolic pathways and ecological roles of Sphingomonas panacisoli within its habitat. Given its classification within the Sphingomonas genus, this bacterium may play a role in biogeochemical cycles, particularly in the degradation of complex organic compounds. Sphingomonas species are often associated with soil and water environments, where they contribute to nutrient cycling and the breakdown of pollutants. Thus, Sphingomonas panacisoli HKS19 could be significant in ecological contexts where bioremediation or soil health is a priority. Understanding its characteristics and capabilities may provide insights into its potential applications in environmental microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas panacisoli
StrainHKS19

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas panacisoli HKS19
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas panacisoli HKS19, Complete Genome

Gene Summary

Adenine Count

592016 bp

Thymine Count

594077 bp

Guanine Count

1109571 bp

Cytosine Count

1107361 bp

Genome Length

3403025 bp

Protein-coding Genes

3320 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional repressor nrdrFPZ24_16550Q1GV13Negative3322378 - 332283917454.9
zinc ribbon domain-containing proteinFPZ24_16555Not AvailableNegative3322887 - 332327013075.8
serine hydroxymethyltransferaseFPZ24_16560A5V5D1Negative3323209 - 332452246203.0
ribose 5-phosphate isomerase bFPZ24_16565P39156Negative3324519 - 332496515259.2
lyttr family transcriptional regulatorFPZ24_16570Not AvailableNegative3325025 - 332584929593.2
duf1579 domain-containing proteinFPZ24_16575Not AvailablePositive3325888 - 332645420237.3
duf3419 family proteinFPZ24_16580Not AvailablePositive3326696 - 332792846263.0
class i sam-dependent methyltransferaseFPZ24_16585Q54818Positive3327949 - 332856022720.2
rna methyltransferaseFPZ24_16590P44676Positive3328529 - 332927226305.5
hypothetical proteinFPZ24_16595Not AvailablePositive3329352 - 33296068872.62

Displaying genes 3311 – 3320 of 3395 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.