Sphingomonas panacisoli HKS19

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas panacisoli HKS19 is a rod-shaped bacterium characterized by the presence of flagella, which suggests it possesses motility. This motility may contribute to its ecological adaptability in various environments. The organism is noted to have a single replicon, indicating a streamlined genetic structure that may reflect its evolutionary adaptations. The complete genome of Sphingomonas panacisoli HKS19 is accessible under the accession number CP042306.1, which provides a resource for further genomic and functional studies. This genomic information can be critical for understanding the metabolic pathways and ecological roles of Sphingomonas panacisoli within its habitat. Given its classification within the Sphingomonas genus, this bacterium may play a role in biogeochemical cycles, particularly in the degradation of complex organic compounds. Sphingomonas species are often associated with soil and water environments, where they contribute to nutrient cycling and the breakdown of pollutants. Thus, Sphingomonas panacisoli HKS19 could be significant in ecological contexts where bioremediation or soil health is a priority. Understanding its characteristics and capabilities may provide insights into its potential applications in environmental microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas panacisoli
StrainHKS19

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas panacisoli HKS19
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas panacisoli HKS19, Complete Genome

Gene Summary

Adenine Count

592016 bp

Thymine Count

594077 bp

Guanine Count

1109571 bp

Cytosine Count

1107361 bp

Genome Length

3403025 bp

Protein-coding Genes

3320 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4337 domain-containing proteinFPZ24_13810Not AvailableNegative2771167 - 277172419402.3
holliday junction branch migration protein ruvaFPZ24_13815A5V883Negative2771736 - 277232919681.1
crossover junction endodeoxyribonuclease ruvcFPZ24_13820Q1GWB3Negative2772465 - 277295016587.3
yebc/pmpr family dna-binding transcriptional regulatorFPZ24_13825Q1GWB2Negative2773087 - 277383026719.2
nad(p)/fad-dependent oxidoreductaseFPZ24_13830P37631Negative2773942 - 277506939956.7
duf2312 domain-containing proteinFPZ24_13835Q2K4D4Negative2775141 - 277540710010.1
duf1244 domain-containing proteinFPZ24_13840Not AvailableNegative2775485 - 277577510559.4
pyruvate kinaseFPZ24_13845O05118Positive2775845 - 277729952222.3
heparinaseFPZ24_13850Not AvailableNegative2777380 - 277799223123.1
50s ribosomal protein l36FPZ24_13855A5VAZ8Negative2778000 - 27781255096.3

Displaying genes 2781 – 2790 of 3395 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.