Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| head-tail adaptor protein | PQ455_00125 | Not Available | + | 18197 - 18484 | 10634.0 |
| duf3168 domain-containing protein | PQ455_00130 | Not Available | + | 18481 - 18867 | 13331.0 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | PQ455_00135 | Not Available | + | 19035 - 19442 | 13822.3 |
| gene transfer agent family protein | PQ455_00140 | Not Available | + | 19439 - 19753 | 11039.6 |
| phage tail assembly chaperone | PQ455_00145 | Not Available | + | 19750 - 19956 | 6929.2 |
| Putative tail protein | PQ455_00150 | Not Available | + | 19949 - 20524 | 18816.5 |
| Putative capsid and scaffold protein | PQ455_00155 | A0MZE7 | + | 20798 - 23083 | 80580.2 |
| Minor tail protein | PQ455_00160 | Not Available | + | 23080 - 23883 | 28586.6 |
| peptidoglycan endopeptidase | PQ455_00165 | Not Available | + | 23885 - 24265 | 12493.2 |
| Gene transfer agent host specificity protein | PQ455_00170 | Not Available | + | 24265 - 26448 | 73635.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.