Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Minor capsid protein | PQ455_01490 | Not Available | - | 294721 - 295047 | 10740.8 |
| hypothetical protein | PQ455_01495 | Not Available | - | 295051 - 295218 | 5955.11 |
| Putative major head protein | PQ455_01500 | B0ZSF3 | - | 295242 - 297200 | 70269.1 |
| Putative portal protein | PQ455_01505 | B0ZSF2 | - | 297193 - 298620 | 52285.7 |
| hypothetical protein | PQ455_01510 | Not Available | - | 298629 - 298838 | 7603.1 |
| Gp02 protein | PQ455_01515 | P36693 | - | 298838 - 300826 | 75151.0 |
| terminase | PQ455_01520 | Not Available | - | 300789 - 301253 | 17005.1 |
| Methyltransferase | PQ455_01525 | P31033 | - | 301562 - 302596 | 36768.8 |
| Isl3 family transposase | PQ455_01530 | P9WKH6 | + | 302876 - 304249 | 53085.4 |
| Helix-turn-helix domain-containing protein | PQ455_07315 | Q37906 | - | 1556908 - 1557543 | 23032.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.