Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydbh domain-containing protein | PQ455_10760 | Not Available | Negative | 2254910 - 2258017 | 106163.0 |
| dna repair protein radc | PQ455_10765 | C3MBW4 | Positive | 2258274 - 2258969 | 24667.9 |
| methyltransferase domain-containing protein | PQ455_10770 | O80543 | Negative | 2258973 - 2259833 | 30609.9 |
| comf family protein | PQ455_10775 | Q8Z222 | Positive | 2259878 - 2260648 | 27025.7 |
| glutaredoxin 3 | PQ455_10780 | P0AC64 | Positive | 2260686 - 2260943 | 9343.33 |
| carbon-nitrogen hydrolase family protein | PQ455_10785 | Q94JV5 | Positive | 2260943 - 2261770 | 28961.5 |
| duf1178 family protein | PQ455_10790 | Not Available | Positive | 2261767 - 2262246 | 16714.8 |
| Trna-arg | Not Available | Not Available | Positive | 2262320 - 2262396 | Not Available |
| gaf domain-containing protein | PQ455_10800 | Not Available | Positive | 2262645 - 2263148 | 17925.7 |
| polyhydroxyalkanoate synthesis repressor phar | PQ455_10805 | P45368 | Negative | 2263252 - 2263827 | 20744.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
