Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | PQ455_09605 | Q2GC97 | Positive | 2057581 - 2058651 | 37442.0 |
| atp-dependent zinc metalloprotease ftsh | PQ455_09610 | C8WEG0 | Positive | 2058719 - 2060677 | 71268.5 |
| class i sam-dependent dna methyltransferase | PQ455_09615 | O31504 | Negative | 2060842 - 2063736 | 108098.0 |
| acyltransferase | PQ455_09620 | P29113 | Positive | 2063893 - 2064945 | 37589.8 |
| s41 family peptidase | PQ455_09625 | Q44879 | Positive | 2065066 - 2066442 | 49298.1 |
| disulfide bond formation protein b | PQ455_09630 | A1TXV0 | Positive | 2066456 - 2066935 | 16758.8 |
| demethoxyubiquinone hydroxylase family protein | PQ455_09635 | Q2RNK3 | Positive | 2066932 - 2067474 | 19354.1 |
| hypothetical protein | PQ455_09640 | Not Available | Positive | 2067525 - 2067929 | 14458.2 |
| fluoride efflux transporter crcb | PQ455_09645 | B0T2G5 | Positive | 2068006 - 2068386 | 12465.7 |
| rlua family pseudouridine synthase | PQ455_09650 | Q9HZM9 | Positive | 2068383 - 2069498 | 40662.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
