Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | PQ455_09305 | Q8G2M7 | Positive | 1986796 - 1988073 | 44859.9 |
| multidrug efflux rnd transporter permease subunit | PQ455_09310 | Q8FWV9 | Positive | 1988177 - 1991359 | 112972.0 |
| tolc family protein | PQ455_09315 | Q51397 | Positive | 1991372 - 1992823 | 50691.3 |
| atp-binding protein | PQ455_09320 | Not Available | Positive | 1992992 - 1994437 | 51858.9 |
| hypothetical protein | PQ455_09325 | Not Available | Negative | 1994473 - 1994709 | 7544.22 |
| autotransporter outer membrane beta-barrel domain-containing protein | PQ455_09330 | Not Available | Negative | 1994812 - 1998006 | 104817.0 |
| hypothetical protein | PQ455_09335 | Not Available | Negative | 1998254 - 1998904 | 22989.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | PQ455_09340 | A8LLC7 | Positive | 1999015 - 1999965 | 33889.9 |
| homoserine kinase | PQ455_09345 | O69015 | Positive | 2000104 - 2001060 | 34510.1 |
| ribonuclease hi | PQ455_09350 | Q2G9E3 | Positive | 2001057 - 2001506 | 16199.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
