Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase subunit alpha | PQ455_09255 | A1KU06 | Positive | 1975212 - 1976561 | 47977.9 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | PQ455_09260 | Q9A354 | Negative | 1976633 - 1978198 | 55482.6 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | PQ455_09265 | A5V9T6 | Negative | 1978195 - 1979562 | 48029.6 |
| glycine cleavage system protein gcvh | PQ455_09270 | B8EPI0 | Negative | 1979624 - 1980007 | 13501.6 |
| glycine cleavage system aminomethyltransferase gcvt | PQ455_09275 | Q54DD3 | Negative | 1980004 - 1981146 | 40505.4 |
| sorbosone dehydrogenase family protein | PQ455_09280 | Q44091 | Positive | 1981555 - 1982832 | 44350.7 |
| para family protein | PQ455_09285 | P37522 | Positive | 1982898 - 1983626 | 25952.6 |
| m28 family metallopeptidase | PQ455_09290 | P83913 | Positive | 1983696 - 1985276 | 55475.8 |
| tetr/acrr family transcriptional regulator | PQ455_09295 | P75952 | Positive | 1985333 - 1985947 | 21917.4 |
| hypothetical protein | PQ455_09300 | Not Available | Positive | 1986392 - 1986799 | 14346.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
