Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_09055 | Not Available | Negative | 1934601 - 1934960 | 13081.6 |
| dipeptide epimerase | PQ455_09060 | P51981 | Negative | 1935075 - 1936064 | 33874.6 |
| polyhydroxyalkanoate depolymerase | PQ455_09065 | Not Available | Negative | 1936064 - 1937320 | 45992.1 |
| abc transporter transmembrane domain-containing protein | PQ455_09070 | Q5RFQ9 | Positive | 1937442 - 1939229 | 63591.5 |
| 3-deoxy-7-phosphoheptulonate synthase class ii | PQ455_09075 | P29976 | Positive | 1939325 - 1940698 | 50592.1 |
| voc family protein | PQ455_09080 | Not Available | Negative | 1940839 - 1941195 | 13127.4 |
| atp-dependent clp protease atp-binding subunit clpx | PQ455_09085 | A5V3U4 | Negative | 1941224 - 1942495 | 45983.9 |
| atp-dependent clp protease proteolytic subunit | PQ455_09090 | Q5NNY8 | Negative | 1942669 - 1943304 | 23253.0 |
| endonuclease/exonuclease/phosphatase family protein | PQ455_09095 | Not Available | Negative | 1943514 - 1944209 | 25824.6 |
| tonb-dependent receptor | PQ455_09100 | P38370 | Positive | 1944466 - 1947792 | 118832.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
