Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comec/rec2 family competence protein | PQ455_09005 | P51973 | Negative | 1920848 - 1922893 | 71496.4 |
| glutamate--trna ligase | PQ455_09010 | A5VB94 | Positive | 1923022 - 1924473 | 52352.0 |
| citrate synthase | PQ455_09015 | O33915 | Positive | 1924504 - 1925790 | 47213.3 |
| smi1/knr4 family protein | PQ455_09020 | Not Available | Positive | 1926056 - 1926622 | 21248.1 |
| hypothetical protein | PQ455_09025 | Not Available | Negative | 1926695 - 1927903 | 42064.6 |
| hypothetical protein | PQ455_09030 | Not Available | Positive | 1928085 - 1930688 | 91491.7 |
| hypothetical protein | PQ455_09035 | Not Available | Negative | 1930858 - 1931259 | 14960.6 |
| oligosaccharide flippase family protein | PQ455_09040 | P37781 | Negative | 1931336 - 1932841 | 53202.4 |
| nucleotide exchange factor grpe | PQ455_09045 | Q2G6M5 | Negative | 1932942 - 1933481 | 19489.1 |
| heat-inducible transcriptional repressor hrca | PQ455_09050 | Q1GWJ6 | Negative | 1933478 - 1934521 | 36604.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
