Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase c-terminal domain-containing protein | PQ455_08905 | Q5LLW7 | Positive | 1890241 - 1892034 | 64291.3 |
| nitronate monooxygenase | PQ455_08910 | Q0S7Q1 | Positive | 1892031 - 1892939 | 31096.6 |
| atp-binding cassette domain-containing protein | PQ455_08915 | Q9A502 | Positive | 1893007 - 1893978 | 33864.2 |
| abc transporter permease | PQ455_08920 | O32168 | Positive | 1893975 - 1894640 | 23114.5 |
| metq/nlpa family abc transporter substrate-binding protein | PQ455_08925 | Q8ZRN1 | Positive | 1894651 - 1895445 | 27861.9 |
| is3 family transposase | PQ455_08930 | P24577 | Negative | 1899805 - 1900925 | 42713.3 |
| crispr-associated endonuclease cas2 | PQ455_08935 | F0Q2T3 | Negative | 1901774 - 1902112 | 13357.0 |
| type ii crispr-associated endonuclease cas1 | PQ455_08940 | C9X1G6 | Negative | 1902109 - 1903032 | 32639.4 |
| type ii crispr rna-guided endonuclease cas9 | PQ455_08945 | A1IQ68 | Negative | 1903055 - 1906357 | 123548.0 |
| dicarboxylate/amino acid:cation symporter | PQ455_08950 | O59010 | Positive | 1906784 - 1908040 | 42153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
