Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | PQ455_08555 | Q9KD53 | Positive | 1811854 - 1812321 | 15900.1 |
| dna methyltransferase | PQ455_08560 | A6WWI2 | Negative | 1812397 - 1813530 | 42033.6 |
| sdr family oxidoreductase | PQ455_08565 | A0QYC2 | Negative | 1813722 - 1813886 | 5737.96 |
| aa3-type cytochrome c oxidase subunit iv | PQ455_08570 | Not Available | Positive | 1814053 - 1814187 | 4652.77 |
| nad(p) transhydrogenase subunit alpha | PQ455_08575 | Q2RSB2 | Positive | 1814203 - 1815324 | 38259.0 |
| duf559 domain-containing protein | PQ455_08580 | P44075 | Positive | 1815399 - 1815791 | 14582.6 |
| nad(p) transhydrogenase subunit alpha | PQ455_08585 | Q2RSB3 | Positive | 1815791 - 1816078 | 10019.7 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | PQ455_08590 | Q2RSB4 | Positive | 1816205 - 1817617 | 49186.6 |
| glutathione s-transferase family protein | PQ455_08595 | A0A0H3CDY2 | Negative | 1817733 - 1818404 | 25794.9 |
| amidase | PQ455_08600 | A0A1P8B760 | Positive | 1818516 - 1820060 | 53430.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
