Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PQ455_08505 | P46359 | Positive | 1798843 - 1801347 | 90853.3 |
| energy transducer tonb | PQ455_08510 | Not Available | Negative | 1801427 - 1801936 | 18456.9 |
| aminotransferase class v-fold plp-dependent enzyme | PQ455_08515 | P18549 | Positive | 1802217 - 1803479 | 45381.7 |
| dna-3-methyladenine glycosylase | PQ455_08520 | Q2Y9K4 | Negative | 1803469 - 1804017 | 19205.2 |
| cupin-like domain-containing protein | PQ455_08525 | Q8RWR1 | Negative | 1804124 - 1805086 | 35022.9 |
| gh92 family glycosyl hydrolase | PQ455_08530 | O86365 | Positive | 1805164 - 1807476 | 82679.4 |
| class a beta-lactamase | PQ455_08535 | Q01166 | Positive | 1807479 - 1808324 | 29039.1 |
| xaa-pro peptidase family protein | PQ455_08540 | P65811 | Negative | 1808348 - 1809607 | 43979.2 |
| replicative dna helicase | PQ455_08545 | Q1RI04 | Negative | 1809710 - 1811212 | 54395.0 |
| upf0262 family protein | PQ455_08550 | Q1GV37 | Positive | 1811358 - 1811840 | 18303.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
