Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | PQ455_08405 | Q965X9 | Positive | 1773896 - 1774987 | 39394.3 |
| trna 2-thiouridine(34) synthase mnma | PQ455_08410 | A5VFM2 | Negative | 1774998 - 1776104 | 39432.2 |
| hypothetical protein | PQ455_08415 | Not Available | Positive | 1776190 - 1776453 | 8813.33 |
| duf1153 domain-containing protein | PQ455_08420 | Not Available | Positive | 1776524 - 1776823 | 11217.6 |
| glsb/yeaq/ymge family stress response membrane protein | PQ455_08425 | P58767 | Positive | 1776947 - 1777204 | 8790.33 |
| simpl domain-containing protein | PQ455_08430 | Q44642 | Negative | 1777393 - 1778127 | 25375.7 |
| efflux rnd transporter periplasmic adaptor subunit | PQ455_08435 | C0Q1F4 | Positive | 1778322 - 1779479 | 40368.1 |
| efflux rnd transporter permease subunit | PQ455_08440 | P25197 | Positive | 1779519 - 1782653 | 112624.0 |
| duf445 domain-containing protein | PQ455_08445 | P39385 | Positive | 1782906 - 1784171 | 45846.1 |
| merr family transcriptional regulator | PQ455_08450 | Q8Z8S3 | Negative | 1784650 - 1785417 | 28120.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
