Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit chi | PQ455_08355 | P43749 | Negative | 1761170 - 1761607 | 16197.2 |
| leucyl aminopeptidase | PQ455_08360 | Q9A7M9 | Negative | 1761632 - 1763053 | 49123.1 |
| lps assembly protein lptd | PQ455_08365 | Q1QA28 | Positive | 1763288 - 1765516 | 81701.3 |
| peptidylprolyl isomerase | PQ455_08370 | Q1GZC0 | Positive | 1765664 - 1766953 | 46440.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | PQ455_08375 | Q5NMX3 | Positive | 1766943 - 1767956 | 34895.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | PQ455_08380 | Q2G9Z2 | Positive | 1767961 - 1768791 | 29060.2 |
| hypothetical protein | PQ455_08385 | Not Available | Negative | 1768893 - 1769414 | 17698.4 |
| rsmb/nop family class i sam-dependent rna methyltransferase | PQ455_08390 | B4SUR0 | Negative | 1769447 - 1770628 | 41367.7 |
| imp dehydrogenase | PQ455_08395 | Q9KH33 | Negative | 1770767 - 1772227 | 51476.0 |
| m28 family peptidase | PQ455_08400 | Not Available | Negative | 1772274 - 1773713 | 48881.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
