Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2171 domain-containing protein | PQ455_07955 | Not Available | Positive | 1676833 - 1677084 | 8738.03 |
| hypothetical protein | PQ455_07960 | Not Available | Negative | 1677262 - 1677426 | 5727.6 |
| ribonucleoside-diphosphate reductase subunit alpha | PQ455_07965 | Q196Z5 | Negative | 1677461 - 1679398 | 71330.5 |
| radical sam family heme chaperone hemw | PQ455_07970 | A5D7B1 | Positive | 1679843 - 1681003 | 41579.5 |
| chorismate mutase | PQ455_07975 | Q51507 | Negative | 1681134 - 1681427 | 10420.6 |
| penicillin-binding protein activator | PQ455_07980 | Q9ZCJ2 | Negative | 1681424 - 1682596 | 40143.1 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | PQ455_07985 | Q2NAK3 | Positive | 1682607 - 1683455 | 29379.6 |
| yran family protein | PQ455_07990 | Q1GWI7 | Positive | 1683452 - 1683805 | 13217.0 |
| glutathione synthase | PQ455_07995 | Q8UII5 | Positive | 1683905 - 1684852 | 34060.0 |
| hypothetical protein | PQ455_08000 | Q9A3J1 | Positive | 1684945 - 1685706 | 26163.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
