Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1, Complete Genome
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | PQ455_06770 | Q9Z5U2 | Negative | 1449538 - 1450203 | 23842.2 |
| outer membrane beta-barrel protein | PQ455_06775 | P0A3U4 | Negative | 1450295 - 1451176 | 31019.0 |
| signal peptidase i | PQ455_06780 | Q8L2J7 | Negative | 1451303 - 1452103 | 29396.5 |
| glucose-6-phosphate isomerase | PQ455_06785 | A5V9W3 | Positive | 1452192 - 1453682 | 53351.1 |
| duf885 family protein | PQ455_06790 | Not Available | Positive | 1453732 - 1455561 | 65404.3 |
| alpha/beta hydrolase | PQ455_06795 | Q9ZD73 | Negative | 1455661 - 1456308 | 23850.7 |
| aminotransferase class v-fold plp-dependent enzyme | PQ455_06800 | Q01179 | Positive | 1456419 - 1457453 | 34996.6 |
| cysteine desulfurase family protein | PQ455_06805 | Q1RHY6 | Positive | 1457450 - 1458586 | 39918.3 |
| 2fe-2s iron-sulfur cluster-binding protein | PQ455_06810 | Q9AKM6 | Positive | 1458583 - 1458918 | 11877.1 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 1458947 - 1459044 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
