Halococcus dombrowskii H4

Gram-negativeCocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halococcaceae

Genus

Halococcus

Description

Halococcus dombrowskii H4 is a Gram-negative cocci bacterium predominantly found on rock surfaces. This organism is characterized by its spherical shape and exhibits a unique genomic structure, possessing a total of six replicons. The presence of multiple replicons can be indicative of a complex evolutionary history and may play a significant role in the organism's adaptability to its habitat. The six accession numbers associated with Halococcus dombrowskii H4 (CP095005.1; CP095006.1; CP095007.1; CP095008.1; CP095009.1; CP095010.1) provide a means for researchers to access its genomic data, which can aid in further studies of its biology and ecology. The specific adaptations that allow this bacterium to thrive in its rocky environment are not detailed, but its habitat suggests it may possess mechanisms for surviving desiccation and nutrient limitation. As a member of the Halococcus genus, it is likely that Halococcus dombrowskii H4 has adapted to extreme conditions, which are common in its ecological niche. The study of such extremophiles can provide insights into microbial life in harsh environments, with potential implications for understanding life's resilience and adaptability on Earth and possibly other planets.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalococcaceae
GenusHalococcus
SpeciesHalococcus dombrowskii
StrainH4

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrock surfaces
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halococcus dombrowskii H4, Complete Genome

Gene Summary

Adenine Count

491725 bp

Thymine Count

489174 bp

Guanine Count

895031 bp

Cytosine Count

891607 bp

Genome Length

2767537 bp

Protein-coding Genes

2808 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is6 family transposaseMUK72_18990P44263Positive179774 - 18111147253.5
ish3 family transposaseMUK72_18995Not AvailableNegative181288 - 18245744721.4
hypothetical proteinMUK72_19000Not AvailablePositive182540 - 18288411686.2
acyl coa:acetate/3-ketoacid coa transferaseMUK72_19005F1CYZ5Positive182987 - 18454955264.7
crispr-associated carf protein csa3MUK72_19010Not AvailableNegative187351 - 18798322956.2
crispr system precrrna processing endoribonuclease ramp protein cas6MUK72_19015Not AvailablePositive188158 - 18900631273.1
is6 family transposaseMUK72_19020Not AvailablePositive189541 - 192329103066.0
type i-d crispr-associated protein cas7/csc2MUK72_19025Not AvailablePositive192332 - 19331835820.5
type i-d crispr-associated protein cas5/csc1MUK72_19030Not AvailablePositive193323 - 19405726971.2
type i-d crispr-associated helicase cas3'MUK72_19035Not AvailablePositive194054 - 19620481270.2

Displaying genes 3791 – 3800 of 4022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.